Generate consensus FASTA files pipeline

This page summarizes the projects mentioned and recommended in the original post on /r/ngs
nextflow ancientdna adna Pipeline pathogen-genomics

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  • eager

    A fully reproducible and state-of-the-art ancient DNA analysis pipeline

    • So after a lot of reading and talking with some people i was able to do it with the eager pipeline (https://github.com/nf-core/eager) migth be a bit dificult to set up, but it is really useful. I leave this here for you and other people that may see this ;)

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

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