Czifile Alternatives
Similar projects and alternatives to czifile
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Scout Monitoring
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ome-zarr-py
Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
czifile reviews and mentions
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Open-source could finally get the world’s microscopes speaking the same language
Looks like CZI is a competitor:
https://www.zeiss.com/microscopy/en/products/software/zeiss-...
https://github.com/cgohlke/czifile
http://www.physics.hmc.edu/~gerbode/wppriv/wp-content/upload...
CZI is basically JPEG compression and is probably missing the multidimensional compressor which is the secret sauce missing from the various formats. It also mentions licensing and legal so is maybe lost in the weeds and not open source.
Without more info, it feels like this is still an open problem.
My interest in this is for video games, since so many are multiple GB in size but are also missing this multidimensional compressor. If we had it, I'd guess a 10:1 to 100:1 reduction in size over what we have now, with no perceptual loss in quality.
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cgohlke/czifile is an open source project licensed under GNU General Public License v3.0 or later which is an OSI approved license.
The primary programming language of czifile is Python.
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