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Sarek Alternatives
Similar projects and alternatives to sarek
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InfluxDB
Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
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configs
Config files used to define parameters specific to compute environments at different Institutions (by nf-core)
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SaaSHub
SaaSHub - Software Alternatives and Reviews. SaaSHub helps you find the best software and product alternatives
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rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a better sarek alternative or higher similarity.
sarek reviews and mentions
Posts with mentions or reviews of sarek.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-03-11.
- Recommendations for software or online resources
- Best somatic variant callers?
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GATK4 automated pipelines in existence?
The sarek pipeline from nf-core might interest you
- Workflow Question
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aws batch keeps the "Desired vCPUs" high long after they should be reduced
The issue is specific to https://github.com/nf-core/sarek and/or it's usage of https://www.nextflow.io/
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A note from our sponsor - SaaSHub
www.saashub.com | 1 Jun 2024
Stats
Basic sarek repo stats
5
343
9.9
4 days ago
nf-core/sarek is an open source project licensed under MIT License which is an OSI approved license.
The primary programming language of sarek is Nextflow.
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